[Bio-linux-list] Installing biolinux 8 Google:main/binary-i386/Packages

[Jimmy Griffin]

Anyway to correct the sha1 error message when adding the biolinux repo to Ubuntu 16.04?


-------- Original message --------
From: Tony Travis <tony.travis at minke-informatics.co.uk>
Date: 05/27/2016 12:05 PM (GMT-05:00)
To: bio-linux-list at bioinformatics.org
Subject: Re: [Bio-linux-list] Installing biolinux 8 Google:main/binary-i386/Packages

On 27/05/16 16:45, Tony Travis wrote:
> [...]
> Tim's sources are here:
>
>> https://github.com/environmentalomics/build-bio-linux/tree/master/upgrade_to_8

Steve Moss has already submitted a pull-request about this bug, but I
don't have write access and can't merge the patch. I don't want to fork
the project so we will have to wait until Tim has time to do it for us.

Meanwhile, I'm working on an "upgrade_to-9.sh" for Ubuntu 16.04 LTS.

I've upgraded a couple of Bio-Linux 8 / Ubuntu 14.04 instances to 16.04
just to see what does/doesn't work. Galaxy is badly broken and I've not
been able to get "x2go-server" working properly yet, but quite a lot of
our existing Bio-Linux 8 is working fine under 16.04 with minor surgery
to dependencies (more details to follow on the bio-linux-dev list).

let us know how you get on with the "upgrade_to_8.sh"?

Bye,

  Tony.

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