[Bio-Linux] QIIME 1.9 biom cmd issue
Andor J Kiss
kissaj at miamioh.edu
Tue Apr 21 14:47:10 EDT 2015
Hi,
Trying to run the command biom summarize-table and I'm getting an
error:
biom
[ 2:47PM]
usage: biom <command> [<args>]
The currently available commands are:
add-metadata Add metadata to a BIOM table
convert Convert to/from the BIOM table format
normalize-table Normalize a BIOM table
show-install-info Provide information about the biom-format
installation
subset-table Subset a BIOM table
validate-table Validate a BIOM-formatted file
The following commands could not be loaded:
summarize-table Error: cannot import name
write_or_print_list_of_strings
Any ideas on how to fix?
Thanks,
--
__________________________________________________________________
Andor J Kiss, Supervisor
Center for Bioinformatics and Functional Genomics
086 Pearson Hall ~ Miami University
700 East High Street
Oxford, Ohio 45056
USA
eMAIL: kissaj at MiamiOH.edu
Telephone: +1 (513) 529-4280
Fax: +1 (513) 529-2431
URL (CBFG): http://www.cas.miamioh.edu/cbfg/
URL (CBFG Services):
https://www.scienceexchange.com/labs/center-for-bioinformatics-functional-genomics
URL (Research): http://openwetware.org/wiki/User:Andor_J_Kiss
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