[R-repo-dev] Update
Allen S. Rout
asr at ufl.edu
Tue May 4 02:41:42 EDT 2010
>> On Tue, 04 May 2010 08:20:42 +0200, Pierre-Yves <pingou at pingoured.fr> said:
> When I looked into the list generated by the first iteration I had
> packages such as bnlearn or lmeSplines or Daim.
> bnlearn has:
> Depends: R (⥠2.8.0), utils
> Suggests: snow, graph, Rgraphviz (⥠1.20.3), lattice
> so regarding the 'depends' it is a valid result, but R2spec uses both
> 'depends' and 'suggests' since we run R CMD CHECK in all packages.
> Therefore the spec file as for 'Requires' all these packages and
> therefore do not build for missing dependencies.
> Same thing for Daim for example.
> Do you see what I meant ?
OK: Yes.
Do you still see a use for that chunk of code? If you do, then I'll
polish it and continue attempting to get a patch in for
getDependencies.
The way to change that behavior is to add the desired sets of
"depends" conditions to the line
dependencies <<- c("Depends", "Imports")
in the 'prep' function.
I've added "Suggests" in a new version of
http://nersp.osg.ufl.edu/~asr/media/calc_buildorders.R
which has the exciting behavior that it no longer converges. :P See
below.
Again, if you think it's still interesting, then I'll look into fixing
that bug.
- Allen S. Rout
> source ("./calc_buildorders.R")
[1] "Prepping"
Warning: dependency âmclust02â is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âkoplsâ is not available
Warning: dependency âR2wdâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependencies âGOâ, âmoe430aâ are not available
Warning: dependency âmclust02â is not available
Warning: dependency âUScensus2000blkâ is not available
Warning: dependency âUNFâ is not available
Warning: dependencies âGOâ, âmoe430aâ are not available
Warning: dependency âasremlâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency ârankregâ is not available
Warning: dependency âiWidgetsâ is not available
Warning: dependency ârankregâ is not available
Warning: dependency âmimRâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âsurvnnetâ is not available
Warning: dependencies âxpose4â, âR2wdâ are not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âgtkDeviceâ is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependencies âpkpkgâ, âgetmfclstuffâ are not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency ârcomâ is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependency âTShistQuote (>= 2010.5.1)â is not available
Warning: dependency âTShistQuote (>= 2010.5.1)â is not available
Warning: dependency âgridSVGâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependency âpdInfoBuilder (>= 2.14.1)â is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âmclust02â is not available
Warning: dependency âRevobaseâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âBRugsâ is not available
Warning: dependency âqtpaintâ is not available
Warning: dependencies âdcparâ, âBRugsâ are not available
Iteration 1; 2367 packages remain.
Iteration 2; 1952 packages remain.
Iteration 3; 1718 packages remain.
Iteration 4; 1591 packages remain.
Iteration 5; 1516 packages remain.
Iteration 6; 1494 packages remain.
Iteration 7; 1492 packages remain.
Iteration 8; 1489 packages remain.
Iteration 9; 1488 packages remain.
Error in `$<-.data.frame`(`*tmp*`, "iter", value = 10) :
replacement has 1 rows, data has 0
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