[Bio-Linux] Package GenomicRanges library

[Pau Marc Muñoz Torres]

Hello

  Has   Package GenomicRanges library from R been updated recently ? when i
execute a funtion of rapdir

library("RAPIDR")
makeBinnedCountsFile(c("nfamele1_sorted.bam","nfamele2_sorted.bam","nMALE1_sorted.bam","nMALE2_sorted.bam","T-SRR611848_1_sorted.bam"),c("nfamele1","nfamele2","nMALE1","nMALE2","T-SRR611848"),"binnedcounts.r",mask=NULL,k=20000)


I am getting the following error in a script that was working a month before

Error in unloadNamespace(package) :
  namespace ‘GenomicRanges’ is imported by ‘RAPIDR’, ‘GenomicAlignments’,
‘Rsamtools’ so cannot be unloaded
Error in library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc
= lib.loc,  :
  Package ‘GenomicRanges’ version 1.20.8 cannot be unloaded

what can i do?

Pau Marc Muñoz Torres
skype: pau_marc
http://www.linkedin.com/in/paumarc
http://www.researchgate.net/profile/Pau_Marc_Torres3/info/
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