[Bio-Linux] Qiime 1.9 dependencies problem

Tarcisio Fedrizzi t.fedrizzi at unitn.it
Thu Apr 9 06:13:12 EDT 2015


Hello,
I write you because I have a problem with the dependencies of qiime.
I'm using ubuntu server 14.04 lts and I've added the repos for biolinux 8:

deb http://nebc.nerc.ac.uk/bio-linux/ unstable bio-linux deb
http://ppa.launchpad.net/nebc/bio-linux/ubuntu trusty main
deb-src http://ppa.launchpad.net/nebc/bio-linux/ubuntu trusty main

The problem with qiime 1.9 is that the package r-cran-optparse is included
neither in ubuntu nor in biolinux. I report this especially because the
trusty release is an LTS and maybe there are other users that want to keep
this release of ubuntu.

Thank you very much.
Best regards,
Tarcisio Fedrizzi.
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