From feargalr at gmail.com  Tue Jan 28 07:26:19 2014
From: feargalr at gmail.com (Feargal Ryan)
Date: Tue, 28 Jan 2014 12:26:19 +0000
Subject: [Bio-Linux] Updating bio-linux qiime from 1.7 to 1.8
Message-ID: <CAPNgz6=04L9nbzfTp5XErqTiAEzCYpW-Y6ixt25M7zfGFHo4HQ@mail.gmail.com>

Hi everyone,

I was wondering if anyone had any advice on this? Should I just use to
Qiime deploy script? or will it be available through the package updater
soon?

Thanks,
Feargal Ryan
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From tbooth at ceh.ac.uk  Tue Jan 28 07:54:50 2014
From: tbooth at ceh.ac.uk (Tim Booth)
Date: Tue, 28 Jan 2014 12:54:50 +0000
Subject: [Bio-Linux] Updating bio-linux qiime from 1.7 to 1.8
In-Reply-To: <CAPNgz6=04L9nbzfTp5XErqTiAEzCYpW-Y6ixt25M7zfGFHo4HQ@mail.gmail.com>
References: <CAPNgz6=04L9nbzfTp5XErqTiAEzCYpW-Y6ixt25M7zfGFHo4HQ@mail.gmail.com>
Message-ID: <1390913690.32595.18.camel@balisaur>

Hi Feargal,

Due to various commitments this month and next I've not been able to
update QIIME yet, and I don't know what will happen if you use the QIIME
deploy script as I've not had time to try that either.  Given that QIIME
for Bio-Linux is quite heavily patched to work in the BL environment I
suspect it won't work, or will partly work but then crash when you try
to use it properly.

I'm looking at the 24th Feb for working on the new package, so if you
really need the new QIIME before then I think the easiest option might
be to use the virtual machine image
(http://qiime.org/install/virtual_box.html).

Cheers,

TIM

On Tue, 2014-01-28 at 12:26 +0000, Feargal Ryan wrote:
> Hi everyone, 
> 
> 
> I was wondering if anyone had any advice on this? Should I just use to
> Qiime deploy script? or will it be available through the package
> updater soon?
> 
> 
> Thanks,
> Feargal Ryan
> 

-- 
Tim Booth <tbooth at ceh.ac.uk>
NERC Environmental Bioinformatics Centre 

Centre for Ecology and Hydrology
Maclean Bldg, Benson Lane
Crowmarsh Gifford
Wallingford, England
OX10 8BB 

http://nebc.nerc.ac.uk
+44 1491 69 2705